Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCGGACCGGAGCTGCAGG
((((((((.(((((.....((&))....))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204446
GeneSymbolAP5S1
Binding site87,108
Score0.846
Seed1
Au0.309
Energy-22.4
Binding len21
Me-5.962
Phylopstem-0.5218300124999999
Phylopflank-0.41692395875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure