Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCGACGACAGCGGACCGGAGCTGCAGG
((((((((.(((((((.((((&))))..)).......))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204447
GeneSymbolAP5S1
Binding site78,108
Score0.846
Seed1
Au0.309
Energy-24.5
Binding len30
Me-4.994
Phylopstem-0.1818549625
Phylopflank-0.24790779124999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure