Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTCCTGTGAACACTTTCCTGTGCAACCAAACAGGAGGTGCCAGGTT
(((((((((....(((......&.)))....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001204504
GeneSymbolDGKH
Binding site5881,5930
Score1.0
Seed1
Au0.529
Energy-18.3
Binding len18
Me-12.641
Phylopstem-0.5189369666666667
Phylopflank-0.13965098499999992
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure