Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCTGACCTCAAAGGAAACTTCAGTCAGTTGCAAA
((((((((((((((((((((.&)))))))))))....................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204517
GeneSymbolKIFAP3
Binding site1246,1287
Score0.923
Seed1
Au0.574
Energy-25.4
Binding len41
Me-3.938
Phylopstem5.212068905
Phylopflank4.766618756250001
Longest consecutive pairings11
Position of longest consecutive pairings30
Pairings in 3prime end7
Position5UTR
2D Structure