Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTGCAAGTGCCGCAGCTTCCCTCAGAGCAT
.(((((((((((((((((((.&))).))))...))))))))).........))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204519
GeneSymbolP2RX5
Binding site1839,1872
Score0.974
Seed1
Au0.441
Energy-22.2
Binding len33
Me-3.793
Phylopstem3.54374009375
Phylopflank2.41162911125
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end7
Position3UTR
2D Structure