Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCCTGACCATGGTCCCTGCCTGGCTGTGGCTGCT
..((((((((((((...((((&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204746
GeneSymbolCDH16
Binding site82,121
Score1.0
Seed1
Au0.338
Energy-22.3
Binding len18
Me-5.925
Phylopstem0.05590037500000002
Phylopflank0.07275818249999998
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure