Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCAGCGTGGGGGGCTGCAGA
((((((((.(.((((((((((&))))))))))....).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204747
GeneSymbolRFC1
Binding site4359,4384
Score1.0
Seed1
Au0.485
Energy-23.9
Binding len25
Me-7.819
Phylopstem2.0159866
Phylopflank1.4920623249999996
Longest consecutive pairings10
Position of longest consecutive pairings15
Pairings in 3prime end8
Position3UTR
2D Structure