Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCCAGCCAGCGCCTTCATCCTGGGGCTGCGAT
((((((((.(((.((.(((((&.)))))))..))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204747
GeneSymbolRFC1
Binding site87,123
Score1.0
Seed1
Au0.426
Energy-23.8
Binding len23
Me-6.516
Phylopstem-0.1459073375
Phylopflank0.47026514174999995
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure