Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTCAGCCAAGTGCTTTGGCCCGGTGCTTCCCGCAGCTGCAC
.(((((((((((..(((.(((&.)))...)))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001362
GeneSymbolDIO3
Binding site1384,1428
Score0.846
Seed1
Au0.294
Energy-26.4
Binding len25
Me-5.939
Phylopstem-0.4398331818181818
Phylopflank-0.17769697812500007
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure