Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAAGCGTCAGCTGCAT
.((((((((((.(((......&))).)).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204848
GeneSymbolTNFAIP8L2-SCNM1
Binding site1224,1240
Score1.0
Seed1
Au0.456
Energy-20.5
Binding len16
Me-7.373
Phylopstem3.257426363636364
Phylopflank1.3818679700000003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure