Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATTGCATTCTGCTCTGCTATGTTACCTGCTAGGC
.(((((((..(((((((((...&)))))))))......................))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001330655
GeneSymbolDDAH1
Binding site2884,2923
Score0.846
Seed1
Au0.559
Energy-18.1
Binding len39
Me-6.092
Phylopstem3.0938957777777776
Phylopflank1.8564287775000001
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end5
Position3UTR
2D Structure