Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTTATAGCCGCCATTAGCATTACTAGAGTTATGCAAA
(((((((((((((((((((((&)))))))))))))....))).............))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204861
GeneSymbolELOC
Binding site1005,1044
Score0.846
Seed1
Au0.721
Energy-21.7
Binding len39
Me-3.938
Phylopstem1.085564042105263
Phylopflank1.25677891
Longest consecutive pairings13
Position of longest consecutive pairings26
Pairings in 3prime end8
Position3UTR
2D Structure