Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGCTGCGGTGGCTGCGGG
((((((((((.((.((..(((&)))..)).)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204863
GeneSymbolELOC
Binding site85,107
Score0.846
Seed1
Au0.368
Energy-21.5
Binding len22
Me-7.619
Phylopstem-0.1276979
Phylopflank-0.001663224999999987
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure