Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCAATGTGAGACTTCCGTAGCTGTT
..(((((((((((((((.(((&))).)))))..........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204868
GeneSymbolSTX16
Binding site2789,2819
Score0.846
Seed1
Au0.485
Energy-22.5
Binding len30
Me-4.957
Phylopstem-0.8961660720000001
Phylopflank-0.8549056325000001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure