Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTACAATGCAGCTGA
...(((((((.(((((.((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204880
GeneSymbolUBE2D1
Binding site879,896
Score0.923
Seed0
Au0.647
Energy-18.6
Binding len17
Me-9.339
Phylopstem2.4555372857142856
Phylopflank2.29927946
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure