Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCGCGGAGCCAGCCTAGCTGCC
..(((((((.(((((......&.)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204880
GeneSymbolUBE2D1
Binding site86,111
Score1.0
Seed1
Au0.25
Energy-18.6
Binding len14
Me-6.433
Phylopstem0.3962751
Phylopflank0.5339921400000001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure