Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTCCGAGAATGGGGCCCTCGGTTTAATAAGCTAGCAGAAATGTATGGTGG
((((((((((.((((.((.((.&)))).)))).)))))).............................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001362460
GeneSymbolCDH10
Binding site2439,2489
Score0.923
Seed1
Au0.544
Energy-21.8
Binding len50
Me-6.995
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings34
Pairings in 3prime end5
Position3UTR
2D Structure