Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACAGGTGGGGCTGTT
..((((((.((.((((.((((&)))).)))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204885
GeneSymbolRAB43
Binding site2834,2854
Score0.846
Seed1
Au0.368
Energy-22.0
Binding len20
Me-9.36
Phylopstem0.0668661
Phylopflank0.20721652887500003
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure