Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACAGGTGGGGCTGTT
..((((((.((.((((.((((&)))).)))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204887
GeneSymbolRAB43
Binding site3216,3236
Score0.923
Seed1
Au0.368
Energy-22.0
Binding len20
Me-9.36
Phylopstem0.299047
Phylopflank-0.363356765
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure