Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACAGGTGGGGCTGTT
..((((((.((.((((.((((&)))).)))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204890
GeneSymbolISY1-RAB43
Binding site3542,3562
Score0.846
Seed1
Au0.368
Energy-22.0
Binding len20
Me-9.36
Phylopstem1.2697623333333332
Phylopflank2.0921104912500006
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure