Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCGTCAGGAGCCAGGA
.((((((.(...(((((((...&)))))))...).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001204911
GeneSymbolUSB1
Binding site604,623
Score0.923
Seed1
Au0.559
Energy-18.9
Binding len19
Me-13.521
Phylopstem-0.29723138571428576
Phylopflank0.08173131500000003
Longest consecutive pairings7
Position of longest consecutive pairings12
Pairings in 3prime end5
PositionCDS
2D Structure