Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTGACTTAGGCAGCTGCT
..(((((((((((((..((((&)))).)))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204961
GeneSymbolPBX1
Binding site6282,6304
Score0.846
Seed1
Au0.588
Energy-20.7
Binding len22
Me-5.19
Phylopstem-0.44914143749999996
Phylopflank-0.05336856749999998
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure