Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTGCTTTGCCTGCCGCCGCGGCTGGGGG
((.((((((((((.((.((((&.)))))).)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001204963
GeneSymbolPBX1
Binding site60,92
Score1.0
Seed0
Au0.324
Energy-26.9
Binding len22
Me-6.352
Phylopstem2.2946022
Phylopflank1.8416305625000002
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end6
Position5UTR
2D Structure