Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACCGGCGGCGGCTGCC
..((((((((((((((.....&))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001362474
GeneSymbolCDKN1C
Binding site1325,1344
Score0.808
Seed1
Au0.426
Energy-22.2
Binding len19
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure