Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTAACCTTTGCTGTAGT
(((((((...(((((.((((.&)))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205028
GeneSymbolMDM1
Binding site2565,2585
Score0.846
Seed1
Au0.721
Energy-18.1
Binding len20
Me-8.783
Phylopstem3.068931857142857
Phylopflank2.7555555475
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure