Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTACTGCCTGGCCTGCCAGGTC
((((((((..(...((((....&.))))...)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001205029
GeneSymbolMDM1
Binding site420,442
Score0.846
Seed1
Au0.515
Energy-17.8
Binding len20
Me-11.729
Phylopstem0.08663887500000003
Phylopflank0.22360629749999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure