Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTACTTCTGGCAGGGTGCT
..(((.((((((..((((((.&))))))..))).)))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205029
GeneSymbolMDM1
Binding site1424,1445
Score0.846
Seed0
Au0.456
Energy-19.0
Binding len21
Me-9.004
Phylopstem-0.1381693833333333
Phylopflank0.06990132400000004
Longest consecutive pairings6
Position of longest consecutive pairings15
Pairings in 3prime end6
Position3UTR
2D Structure