Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTCTTTGTGCCGCAGCTTCGCAGT
(((((((((((((...(((((&)).)))...)))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205121
GeneSymbolATG13
Binding site314,339
Score0.846
Seed1
Au0.426
Energy-22.1
Binding len25
Me-5.763
Phylopstem0.29709583999999994
Phylopflank1.1116401075
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end5
Position5UTR
2D Structure