Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACCAGGGTGACTGCGGGATTCCGATCTGCGCCGGAGCTGCGAT
((((((((.(((.(((.((((&.)))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205179
GeneSymbolALKBH2
Binding site17,63
Score0.846
Seed1
Au0.338
Energy-23.6
Binding len21
Me-6.283
Phylopstem0.181291
Phylopflank1.6045712128750003
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end7
Position5UTR
2D Structure