Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCCCTGTGTGCTGGC
..((((((((((..((((....&))))..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001205206
GeneSymbolSLC19A1
Binding site3244,3261
Score0.923
Seed1
Au0.368
Energy-17.5
Binding len17
Me-7.103
Phylopstem3.9791210000000006
Phylopflank1.2768330290000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure