Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCGCAGCTGCGC
.(((((((((((((((.....&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205206
GeneSymbolSLC19A1
Binding site910,926
Score0.808
Seed1
Au0.279
Energy-28.9
Binding len16
Me-3.793
Phylopstem-1.0037518466666668
Phylopflank-1.03471430775
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure