Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGCCGCAGCTGCGC
.(((((((((((((((.....&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205207
GeneSymbolSLC19A1
Binding site818,834
Score0.885
Seed1
Au0.279
Energy-28.9
Binding len16
Me-3.793
Phylopstem-1.3145806666666666
Phylopflank-1.53647162025
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure