Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGTGCTTTGTGTGTGTGCCAGT
..((((((((((..........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001205228
GeneSymbolSORT1
Binding site3104,3126
Score0.846
Seed1
Au0.559
Energy-16.9
Binding len12
Me-8.071
Phylopstem-0.16760692000000005
Phylopflank0.24331473375000012
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure