Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGCACCGGGCTGCGGG
((((((((.(((.(((.((((&))))..)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001362531
GeneSymbolCKB
Binding site1005,1026
Score0.923
Seed1
Au0.353
Energy-22.1
Binding len21
Me-6.283
Phylopstem3.6871390125
Phylopflank4.595922472499999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure