Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCCCTTCTGCAGTTACTTGCT
..((((((((((..(((((((&)))))))....)))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205254
GeneSymbolOCLN
Binding site5331,5357
Score0.923
Seed1
Au0.574
Energy-18.1
Binding len26
Me-7.103
Phylopstem-0.2651098642857143
Phylopflank0.01169729874999998
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end7
Position3UTR
2D Structure