Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACAGTTTCAGCATGCT
..(((((((.(((((((((((&))))))))))).)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205262
GeneSymbolRAD54B
Binding site3548,3569
Score0.923
Seed1
Au0.735
Energy-18.0
Binding len21
Me-6.2
Phylopstem0.6910728454545455
Phylopflank0.4610336062499999
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure