Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATTTACTGTGCCAGGA
.(((((((((....((((((((&))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001205293
GeneSymbolCACNA1E
Binding site9669,9687
Score0.846
Seed1
Au0.647
Energy-19.4
Binding len18
Me-12.111
Phylopstem0.2908268444444444
Phylopflank0.23358401374999999
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure