Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTCCATGCAGCTGCGGC
(((((((((((...((.((((&))))))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001362679
GeneSymbolBBS9
Binding site3343,3365
Score1.0
Seed1
Au0.368
Energy-23.1
Binding len22
Me-9.43
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure