Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGTTGGGACCGCAGATTCTGCAGC
((((((((((((((.((((((&))).))).))))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205294
GeneSymbolCACNA1E
Binding site8272,8298
Score0.846
Seed1
Au0.382
Energy-25.7
Binding len26
Me-4.673
Phylopstem-0.046228311764705876
Phylopflank0.12323625125000001
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure