Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCAGCACCACTGCCACCAGGGCAACTGCAGCAGCAT
.(((.(((((((((((..(((&.)))...))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205294
GeneSymbolCACNA1E
Binding site7436,7479
Score0.923
Seed0
Au0.397
Energy-25.5
Binding len23
Me-7.912
Phylopstem0.30061310909090905
Phylopflank0.365298985
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure