Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGGGACATGCTGTCAGGATGGTCTG
(((((((((((((((((((((&)))))))))....)))).))))...)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_001205301
GeneSymbolEGFLAM
Binding site4385,4415
Score0.808
Seed1
Au0.412
Energy-29.0
Binding len30
Me-3.938
Phylopstem-0.3037191755172413
Phylopflank-0.17008317949999988
Longest consecutive pairings9
Position of longest consecutive pairings21
Pairings in 3prime end8
Position3UTR
2D Structure