Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCGGGACTTGGTGAAACTTTGCAGGCGCCGGCTGCGAA
(((((((((((.(((((((((&.))))))))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205301
GeneSymbolEGFLAM
Binding site156,196
Score0.846
Seed1
Au0.412
Energy-28.6
Binding len24
Me-7.284
Phylopstem1.8610012500000002
Phylopflank0.6615612550000002
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end8
Position5UTR
2D Structure