Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCACAACTGGACTGCTGCAGC
(((((((..((((((((((((&))))))))..))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205316
GeneSymbolSTEAP4
Binding site4351,4377
Score0.885
Seed1
Au0.529
Energy-23.8
Binding len26
Me-7.308
Phylopstem-0.26125628571428566
Phylopflank0.08745362500000002
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end8
Position3UTR
2D Structure