Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTGACTCAGGCTGCAC
.(((((((..((((((((((.&)))))).))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205317
GeneSymbolRIMS4
Binding site3622,3643
Score0.846
Seed1
Au0.368
Energy-22.9
Binding len21
Me-6.092
Phylopstem0.5250914
Phylopflank0.2809255625
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure