Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCCTTCCTTCCCTTGTCCCCGTAGGGTTATAGCTGGAGCTGCC
..((((((.(((((((((...&.))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205317
GeneSymbolRIMS4
Binding site2599,2645
Score0.981
Seed1
Au0.529
Energy-22.7
Binding len18
Me-6.013
Phylopstem-0.4654457777777778
Phylopflank0.023267952500000008
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure