Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTAGAGCTGCGGGTGA
...((.((((((((.((((..&)))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205319
GeneSymbolNXN
Binding site1490,1507
Score0.846
Seed0
Au0.456
Energy-20.5
Binding len17
Me-9.151
Phylopstem2.481785125
Phylopflank1.5459009987499996
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end5
Position3UTR
2D Structure