Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACTTCATCGGCCCACAGACACCACCGCAGTTTCTTCTTAAAGGCTCTGCTGATCGGTGTTGCAGT
(((((((((((((.(((((((&)))))))....................)))))))).............................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001205329
GeneSymbolJAM3
Binding site1255,1325
Score0.872
Seed1
Au0.544
Energy-20.0
Binding len70
Me-4.794
Phylopstem-0.9154099380952381
Phylopflank-0.79995067375
Longest consecutive pairings8
Position of longest consecutive pairings35
Pairings in 3prime end7
Position3UTR
2D Structure