Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCCGAGAGGTGGTTACATTCGTTGAAGGACACCAGCTGCGGA
(((((((((..(((.(.....&.).)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001206426
GeneSymbolATP5MK
Binding site3,50
Score0.846
Seed1
Au0.515
Energy-18.6
Binding len18
Me-8.74
Phylopstem4.2578788888888885
Phylopflank1.2422577609999998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure