Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCAGTGCAGGAGAGACAGTGAGGCTGCACCCACCCAGGAGTGTGGCCACGTGG
((((((((.((((((((((...&.))))))))).).))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001362758
GeneSymbolCD40
Binding site836,891
Score0.923
Seed1
Au0.353
Energy-24.5
Binding len23
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end5
Position3UTR
2D Structure