Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACCCAGGAGGATGGCAAAGAGAGTCGCATCTCAGTGCAGGAGAGACAGTGA
(((((.(((((((((((((.((&)))))))))).............................)))))...))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001362758
GeneSymbolCD40
Binding site806,859
Score0.846
Seed0
Au0.382
Energy-22.1
Binding len53
Me-5.839
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings43
Pairings in 3prime end7
Position3UTR
2D Structure